USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: O00151 USC-OGP 2-DE database:  O00151 O00151 General information about the entry View entry in simple text format Entry name PDLI1_HUMAN Primary accession number O00151 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=PDZ and LIM domain protein 1; AltName: Full=C-terminal LIM domain protein 1; AltName: Full=Elfin; AltName: Full=LIM domain protein CLP-36;. Gene name Name=PDLIM1 Synonyms=CLIM1, CLP36 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0450: pI=6.04; Mw=35247 SPOT OGP-0453: pI=6.25; Mw=35075 SPOT OGP-0454: pI=6.49; Mw=35075 SPOT OGP-0461: pI=6.26; Mw=34062 SPOT OGP-0572: pI=5.11; Mw=19665 SPOT OGP-0595: pI=5.79; Mw=13125 SPOT OGP-0598: pI=6.27; Mw=12454 PLATELET_6-11 {PLATELET 6-11} Homo sapiens (Human)   map experimental info   PLATELET_6-11 MAP LOCATIONS: SPOT OGP-0970: pI=5.86; Mw=35888 SPOT OGP-0971: pI=6.31; Mw=35888 SPOT OGP-0973: pI=6.04; Mw=35720 SPOT OGP-0975: pI=6.22; Mw=35637 SPOT OGP-0976: pI=6.11; Mw=35553 SPOT OGP-0978: pI=6.47; Mw=35372 SPOT OGP-0980: pI=6.24; Mw=33441 SPOT OGP-1055: pI=6.10; Mw=19308 Cross-references UniProtKB/Swiss-Prot O00151; PDLI1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name PDLI1_HUMAN Primary accession number O00151 Secondary accession number(s) B2RBS6 Q5VZH5 Q9BPZ9 Sequence was last modified on  January 23, 2007 (version 4) Annotations were last modified on  March 15, 2017 (version 164) Name and origin of the protein Description RecName: Full=PDZ and LIM domain protein 1; AltName: Full=C-terminal LIM domain protein 1; AltName: Full=Elfin; AltName: Full=LIM domain protein CLP-36; Gene name Name=PDLIM1 Synonyms=CLIM1, CLP36 Encoded on Name=PDLIM1; Synonyms=CLIM1, CLP36 Keywords 3D-structure; Acetylation; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; LIM domain; Metal-binding; Phosphoprotein; Polymorphism; Reference proteome; Zinc. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL U90878; AAC05580.1; -; mRNA EMBL AJ310549; CAC32846.1; -; mRNA EMBL AK314792; BAG37323.1; -; mRNA EMBL AY923052; AAW82438.1; -; Genomic_DNA EMBL AL160288; CAH70720.1; -; Genomic_DNA EMBL AL157834; CAH70720.1; JOINED; Genomic_DNA EMBL AL157834; CAH72341.1; -; Genomic_DNA EMBL AL160288; CAH72341.1; JOINED; Genomic_DNA EMBL BC000915; AAH00915.1; -; mRNA EMBL BC018755; AAH18755.1; -; mRNA CCDS CCDS7441.1; -; . RefSeq NP_066272.1; NM_020992.3; . UniGene Hs.368525; -; . PDB 1X62; NMR; -; A=250-315 PDB 2PKT; X-ray; 1.50 A; A=1-86 PDBsum 1X62; -; . PDBsum 2PKT; -; . ProteinModelPortal O00151; -; . SMR O00151; -; . BioGrid 114572; 30; . IntAct O00151; 14; . MINT MINT-5005794; -; . STRING 9606.ENSP00000360305; -; . iPTMnet O00151; -; . PhosphoSitePlus O00151; -; . SwissPalm O00151; -; . OGP O00151; -; . UCD-2DPAGE O00151; -; . EPD O00151; -; . PaxDb O00151; -; . PeptideAtlas O00151; -; . PRIDE O00151; -; . DNASU 9124; -; . Ensembl ENST00000329399; ENSP00000360305; ENSG00000107438; . GeneID 9124; -; . KEGG hsa:9124; -; . CTD 9124; -; . DisGeNET 9124; -; . GeneCards PDLIM1; -; . HGNC HGNC:2067; PDLIM1; . HPA CAB072838; -; . HPA CAB072840; -; . HPA HPA017010; -; . MIM 605900; gene; . neXtProt NX_O00151; -; . OpenTargets ENSG00000107438; -; . PharmGKB PA33158; -; . eggNOG KOG1703; Eukaryota; . eggNOG ENOG410XRD4; LUCA; . GeneTree ENSGT00590000082980; -; . HOGENOM HOG000290704; -; . HOVERGEN HBG061371; -; . InParanoid O00151; -; . OMA ATANLCI; -; . OrthoDB EOG091G0A6C; -; . PhylomeDB O00151; -; . TreeFam TF106408; -; . ChiTaRS PDLIM1; human; . EvolutionaryTrace O00151; -; . GeneWiki PDLIM1; -; . GenomeRNAi 9124; -; . PRO PR:O00151; -; . Proteomes UP000005640; Chromosome 10; . Bgee ENSG00000107438; -; . CleanEx HS_PDLIM1; -; . ExpressionAtlas O00151; baseline and differential; . Genevisible O00151; HS; . GO GO:0005913; C:cell-cell adherens junction; IDA:BHF-UCL; . GO GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; . GO GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell; . GO GO:0005925; C:focal adhesion; IDA:UniProtKB; . GO GO:0005667; C:transcription factor complex; IEA:Ensembl; . GO GO:0098641; F:cadherin binding involved in cell-cell adhesion; IDA:BHF-UCL; . GO GO:0003713; F:transcription coactivator activity; IEA:Ensembl; . GO GO:0008270; F:zinc ion binding; IEA:InterPro; . GO GO:0006355; P:regulation of transcription; DNA-templated; IEA:Ensembl GO GO:0001666; P:response to hypoxia; IEA:Ensembl; . GO GO:0006979; P:response to oxidative stress; TAS:ProtInc; . Gene3D 2.10.110.10; -; 1; . Gene3D 2.30.42.10; -; 1; . InterPro IPR031847; DUF4749; . InterPro IPR028537; PDLIM1; . InterPro IPR001478; PDZ; . InterPro IPR006643; Zasp-like_motif; . InterPro IPR001781; Znf_LIM; . PANTHER PTHR24214:SF44; PTHR24214:SF44; 1; . Pfam PF15936; DUF4749; 1; . Pfam PF00412; LIM; 1; . Pfam PF00595; PDZ; 1; . SMART SM00132; LIM; 1; . SMART SM00228; PDZ; 1; . SMART SM00735; ZM; 1; . SUPFAM SSF50156; SSF50156; 1; . PROSITE PS00478; LIM_DOMAIN_1; 1; . PROSITE PS50023; LIM_DOMAIN_2; 1; . PROSITE PS50106; PDZ; 1; .

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• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
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